The detailed information of tRNA gene sequence


Sequence ID>ENV09001750
Genome IDACQI01004891
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 3522
End posion on genome 3608
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgatgaccat
tRNA gene sequence 
GCCAGTGTGATGGAATTGGTAGACATGACGGATTCAAAATCCGTTGCCTTTGCAGGCGTG
GCGGTTCGAGTCCGCCCACTGGTACCA
Downstream region at tRNA end position 
attacgtata
Secondary structure (Cloverleaf model)
>ENV09001750	Leu	CAA
                   t      ACCA attacgtata
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      T A A        G      | | | | |     G
    T       G G T A       G G C G G     C
    G         | | |                 T T
    G       A C A T
      T A G        G     TGCCTTTGCAGGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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