The detailed information of tRNA gene sequence


Sequence ID>ENV09001754
Genome IDACQI01005061
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 419
End posion on genome 348
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatagttcga
tRNA gene sequence 
GGGTCTGTAGTTAAATGGCATAATTTTGCTCTCCAAAAGCAAAGTTCCCTGTTCGAGTCG
GGGCAGACCCGCac
Downstream region at tRNA end position 
attcttgttg
Secondary structure (Cloverleaf model)
>ENV09001754	Trp	CCA
                   a      GCac attcttgttg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     G G G G C     A
        A A        A      | | | + |     G
      T     A T T G       C C C T G     C
      G     | | | +                 T T
      G     T A A T
        C A        T     AGTT
                    T - A
                    T - A
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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