The detailed information of tRNA gene sequence


Sequence ID>ENV09001765
Genome IDACQI01005272
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 593
End posion on genome 668
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caagaaattt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCACCTGCCTTGCACGCAGGAGGTCTGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
ttttacttaa
Secondary structure (Cloverleaf model)
>ENV09001765	Ala	TGC
                   t      ACCA ttttacttaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A        | | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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