The detailed information of tRNA gene sequence


Sequence ID>ENV09001769
Genome IDACQI01005275
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 345
End posion on genome 421
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccactatt
tRNA gene sequence 
GGAGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGTCGAGGGTTCGAG
TCCCTTCTATTCCGCCA
Downstream region at tRNA end position 
ttttctttga
Secondary structure (Cloverleaf model)
>ENV09001769	Asp	GTC
                   t      GCCA ttttctttga
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     A - T
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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