The detailed information of tRNA gene sequence


Sequence ID>ENV09001774
Genome IDACQI01005460
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1266
End posion on genome 1191
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ccttctatca
tRNA gene sequence 
GGGCCGTTAGCTCAGCTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGCGCGTTCGAAT
CGCGCACGGCCCACCA
Downstream region at tRNA end position 
tgttcctaat
Secondary structure (Cloverleaf model)
>ENV09001774	Lys	TTT
                   a      ACCA tgttcctaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C G C G C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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