The detailed information of tRNA gene sequence


Sequence ID>ENV09001780
Genome IDACQI01005936
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1191
End posion on genome 1266
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcatgtgtgc
tRNA gene sequence 
GACCCCTTCGTCTAGTGGTCCAGGACCCCGCCCTTTCACGGCGGTAACAGGGGTTCAAAT
CCCCTAGGGGTCGCCA
Downstream region at tRNA end position 
tttagttact
Secondary structure (Cloverleaf model)
>ENV09001780	Glu	TTC
                   c      GCCA tttagttact
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C C A        C     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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