The detailed information of tRNA gene sequence


Sequence ID>ENV09001782
Genome IDACQI01005936
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 1395
End posion on genome 1471
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttttcatgc
tRNA gene sequence 
GCGGCGGTAGTTTAGTTGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCCGCCGCGCCA
Downstream region at tRNA end position 
tgataatttt
Secondary structure (Cloverleaf model)
>ENV09001782	Asp	GTC
                   c      GCCA tgataatttt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       T T T G       G C G A G     C
    G       + | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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