The detailed information of tRNA gene sequence


Sequence ID>ENV09001790
Genome IDACQI01006182
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 571
End posion on genome 646
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gattatgatt
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCGAGC
CCAGTATCACCCACCA
Downstream region at tRNA end position 
attatcttta
Secondary structure (Cloverleaf model)
>ENV09001790	Val	TAC
                   t      ACCA attatcttta
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          C G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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