The detailed information of tRNA gene sequence


Sequence ID>ENV09001804
Genome IDACQI01008849
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 267
End posion on genome 175
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
tattgtgtct
tRNA gene sequence
GGTGACGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTATAGCC
TCATCGAGAGTTCGAATCTCTCCGTCACCGCCA
Downstream region at tRNA end position
ttttcctaat
Secondary structure (Cloverleaf model)
>ENV09001804	Ser	GCT
                   t      GCCA ttttcctaat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTATAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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