The detailed information of tRNA gene sequence


Sequence ID>ENV09001828
Genome IDACQI01012112
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 199
End posion on genome 275
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gggcgattgc
tRNA gene sequence 
GCGGTTGTAGCTCAGCTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
cttttctttc
Secondary structure (Cloverleaf model)
>ENV09001828	Asp	GTC
                   c      GCCA cttttctttc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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