The detailed information of tRNA gene sequence


Sequence ID>ENV09001833
Genome IDACQI01013117
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 375
End posion on genome 301
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgcatatat
tRNA gene sequence 
CGCGGGGTAGAGAAGCGGTATCTCGTCGGGCTCATAACCCGAAGATCACTGGTTCAAGTC
CAGTCTCCGCAACCA
Downstream region at tRNA end position 
tttaaaatca
Secondary structure (Cloverleaf model)
>ENV09001833	Met	CAT
                   t      ACCA tttaaaatca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     T G A C C     A
        G A        A      | | | | |     A
      C     A G A G       A C T G G     C
      G     | | | |                 T T
      G     T C T C
        T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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