The detailed information of tRNA gene sequence


Sequence ID>ENV09001840
Genome IDACQI01014424
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 308
End posion on genome 395
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatgtgtatt
tRNA gene sequence 
GGAGAAGTGGCTGAGTGGTTTAAAGCGCATCGTTGGAAACGATGTGTACAGCAATGTACC
GCAGGTTCGAATCCTGTCTTCTCCGCCA
Downstream region at tRNA end position 
gttttgtaaa
Secondary structure (Cloverleaf model)
>ENV09001840	Ser	GGA
                   t      GCCA gttttgtaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TGTACAGCAATGTACC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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