The detailed information of tRNA gene sequence


Sequence ID>ENV09001844
Genome IDACQI01015463
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 631
End posion on genome 556
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caagtaattc
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGTGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
aattttattt
Secondary structure (Cloverleaf model)
>ENV09001844	Ala	TGC
                   c      ACCA aattttattt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | +                 T T
    G       G A G T
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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