The detailed information of tRNA gene sequence


Sequence ID>ENV09001854
Genome IDACQI01016944
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 76
End posion on genome 163
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgaaaatagg
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGACGAACGCGCACGCTTGGAAAGTGTGTAAAGAGAAATCTTTC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tataaaaatc
Secondary structure (Cloverleaf model)
>ENV09001854	Ser	GGA
                   g      GCCA tataaaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G           | |                 T T
    A       A C G C
      C G A        G     TAAAGAGAAATCTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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