The detailed information of tRNA gene sequence


Sequence ID>ENV09001857
Genome IDACQI01017040
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 109
End posion on genome 33
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
aacacaaacc
tRNA gene sequence
CGGGGATTAGCTCAGTTGGCTAGAGCGCTCGCCTTGCACGCGAGAGGTCAGGAGTTCGAC
TCTCCTATTCTCCACCA
Downstream region at tRNA end position
ttatttattt
Secondary structure (Cloverleaf model)
>ENV09001857	Ala	TGC
                   c      ACCA ttatttattt
                     C   C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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