The detailed information of tRNA gene sequence


Sequence ID>ENV09001878
Genome IDACQI01019978
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 620
End posion on genome 544
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacatattga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
aattctagaa
Secondary structure (Cloverleaf model)
>ENV09001878	Met	CAT
                   a      ACCA aattctagaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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