The detailed information of tRNA gene sequence


Sequence ID>ENV09001882
Genome IDACQI01021036
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 548
End posion on genome 473
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cagcgcagga
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGTCCGGCTCCACCA
Downstream region at tRNA end position 
gtgcttggct
Secondary structure (Cloverleaf model)
>ENV09001882	Ala	TGC
                   a      ACCA gtgcttggct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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