The detailed information of tRNA gene sequence


Sequence ID>ENV09001885
Genome IDACQI01021837
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 531
End posion on genome 456
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctatattttt
tRNA gene sequence 
ACGGGAGTAGCTCAATTGGTAGAGTAGTGGTCTCCAAAACCATTGGTTGCGGGTTCGAGT
CCCTCCTCCCGTGCTA
Downstream region at tRNA end position 
aataaaaatt
Secondary structure (Cloverleaf model)
>ENV09001885	Trp	CCA
                   t      GCTA aataaaaatt
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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