The detailed information of tRNA gene sequence


Sequence ID>ENV09001886
Genome IDACQI01021880
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 184
End posion on genome 110
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaaatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCGAATC
CTGTCCCCGCTACTA
Downstream region at tRNA end position 
accgcccggt
Secondary structure (Cloverleaf model)
>ENV09001886	Met	CAT
                   t      ACTA accgcccggt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
        G A        G      + | | | |     G
      T     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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