The detailed information of tRNA gene sequence


Sequence ID>ENV09001897
Genome IDACQI01023147
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 263
End posion on genome 176
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agatcttatg
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCTAAAGCGGCACACTGCTAATGTGTTATACAGAGATGTATC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atttacgatt
Secondary structure (Cloverleaf model)
>ENV09001897	Ser	GCT
                   g      GCCA atttacgatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    C       A A G C
      C T A        G     TATACAGAGATGTATC
                    G + T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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