The detailed information of tRNA gene sequence


Sequence ID>ENV09001910
Genome IDACQI01024967
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 18
End posion on genome 94
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttaaagtgt
tRNA gene sequence 
CGCGGGATAGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCTGGTTCAAA
TCCGGCTCCCGCAACCA
Downstream region at tRNA end position 
attttaactt
Secondary structure (Cloverleaf model)
>ENV09001910	Met	CAT
                   t      ACCA attttaactt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G C C     A
      T G A        A      | | + | |     A
    T       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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