The detailed information of tRNA gene sequence


Sequence ID>ENV09001911
Genome IDACQI01025187
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 688
End posion on genome 612
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ctcgttactt
tRNA gene sequence 
GGGTCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCTCGACCCACCA
Downstream region at tRNA end position 
taatccttcg
Secondary structure (Cloverleaf model)
>ENV09001911	Ile	GAT
                   t      ACCA taatccttcg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G + T          T G
                    T     C C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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