The detailed information of tRNA gene sequence


Sequence ID>ENV09001916
Genome IDACQI01026173
Search identical group
Phylum/ClassHydrothermal vent metagenome LCHCB.C1
Species
Start position on genome 587
End posion on genome 511
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcaaattga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
cattcttaaa
Secondary structure (Cloverleaf model)
>ENV09001916	Met	CAT
                   a      ACCA cattcttaaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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