The detailed information of tRNA gene sequence


Sequence ID>ENV09002182
Genome IDACXJ01010920
Search identical group
Phylum/ClassMine drainage metagenome Contig1
Species
Start position on genome 5302
End posion on genome 5227
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttttccccaa
tRNA gene sequence
GGCGATGTAGCTCAGTCGGCAGAGCAGGTGAATCATAATCACTCGGTCGGGGGTTCGAAT
CCCTCCATCGCCACCA
Downstream region at tRNA end position
actgaaaatc
Secondary structure (Cloverleaf model)
>ENV09002182	Met	CAT
                   a      ACCA actgaaaatc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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