The detailed information of tRNA gene sequence


Sequence ID>ENV09002233
Genome IDACXJ01011378
Search identical group
Phylum/ClassMine drainage metagenome Contig1
Species
Start position on genome 13115
End posion on genome 13039
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaataatctt
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGCAGAGCTCCGGTCTCCAAAACCGGTGGTTGGGGGTTCAAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
atgaaatagg
Secondary structure (Cloverleaf model)
>ENV09002233	Trp	CCA
                   t      GCCA atgaaatagg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        T     TGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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