The detailed information of tRNA gene sequence


Sequence ID>ENV09002265
Genome IDACXJ01012509
Search identical group
Phylum/ClassMine drainage metagenome Contig1
Species
Start position on genome 2952
End posion on genome 2878
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
aagaatatat
tRNA gene sequence 
TGCGGGTGGGAGGTAAGGAATCTCCTCGGTCTCATACGCCGAACGAAACGGGTTCAATTC
CTGTACCCGCAACCA
Downstream region at tRNA end position 
atggagcgcg
Secondary structure (Cloverleaf model)
>ENV09002265	Pseudo	CAT
                   t      ACCA atggagcgcg
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    G     T G T C C     A
        A T        G      | | + | |     A
      A     G G A G       A C G G G     C
      G     + | | |                 T T
      G     T C T C
        A A        C     ACGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    T + G
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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