The detailed information of tRNA gene sequence


Sequence ID>ENV09003347
Genome IDADGO01022600
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 798
End posion on genome 722
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcgccggtgt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTAGCTTCGGGAGCTAGGGGCCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
gcgcgcagtt
Secondary structure (Cloverleaf model)
>ENV09003347	Pro	CGG
                   t      ACCA gcgcgcagtt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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