The detailed information of tRNA gene sequence


Sequence ID>ENV09003390
Genome IDADGO01029673
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 681
End posion on genome 771
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtatcacagt
tRNA gene sequence 
GGGGAGGTCGCATAGTTGGCCTAGTGCGGCGGTTTGCTAAACCGCTAGGGGAGCAATCCC
CTCGAGGGTTCGAATCCCTCCCTCCCCGCCA
Downstream region at tRNA end position 
aaccccctcc
Secondary structure (Cloverleaf model)
>ENV09003390	Ser	GCT
                   t      GCCA aaccccctcc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G A G G G     C
  G         + | | |                 T T
  C         G T G C
    C T A          G     TAGGGGAGCAATCCCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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