The detailed information of tRNA gene sequence


Sequence ID>ENV09003470
Genome IDADGO01052983
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 628
End posion on genome 553
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cttaccttaa
tRNA gene sequence 
GGAAGCATAGCTCAGCTGGTTTAGAGCATCTGCCTTACAAGCAGAGGGTCCGCGGTTCGA
ATCCGTGTGCTTCCACtc
Downstream region at tRNA end position 
catccccgac
Secondary structure (Cloverleaf model)
>ENV09003470	Val	TAC
                   a      ACtc catccccgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     G T G C C     A
    T C G A        A      | + | | |     G
  G         C T C G       C G C G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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