The detailed information of tRNA gene sequence


Sequence ID>ENV09003703
Genome IDADGO01141729
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 273
End posion on genome 350
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttccccgga
tRNA gene sequence 
GGGCTCGTAGCTCAACCTGGTCAGAGCAGCGGACTCATAATCCGTAGGTTGCAGGTTCAA
ATCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
gcatgggtcc
Secondary structure (Cloverleaf model)
>ENV09003703	Met	CAT
                   a      ACCA gcatgggtcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G T C C     A
    C C A A        A      | | | | |     A
  T         C T C G       G C A G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          A     AGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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