The detailed information of tRNA gene sequence


Sequence ID>ENV09004152
Genome IDADKJ01000117
Search identical group
Phylum/ClassHot springs metagenome ctg_1106445192081
Species
Start position on genome 1245
End posion on genome 1170
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acccttgtgg
tRNA gene sequence 
GGCGGGGTAGGGCAGTTGGTAGCCCGCCAGGCTCATAACCTGGAGGTCGTGGGTTCAAGT
CCCACCCCCGTTACCA
Downstream region at tRNA end position 
gcggcccggg
Secondary structure (Cloverleaf model)
>ENV09004152	Met	CAT
                   g      ACCA gcggcccggg
                     G + T
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T G A        A      | | | | |     A
    T       C G G G       G T G G G     C
    G       | | | |                 T T
    G       G C C C
      T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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