The detailed information of tRNA gene sequence


Sequence ID>FG090100359
Genome IDAL590442
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr2
Start position on genome 62756
End posion on genome 62675
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtactggcagccgtttgacaagttccggcttatgatgagccgaagatgaagctgtggtgctgtgagtatatgattggaggcctctttcgatgaacttgga
tRNA gene sequence 
GGCGGTGTGGCCGAGTGGTCAAAGGCAATCGATTCGAAATCGATGGACTCTGTCCCCACA
GGTTCGAATCCTGTCGCCGTCGggg
Downstream region at tRNA end position 
ttgctttttgatatgaatggcgcaaatttttgatccccaatggccacggaaagactgaatcaggttaggacatcggtattccaagcgtcccagtctcttc
Secondary structure (Cloverleaf model)
>FG090100359	Ser	CGA
                   a      Gggg ttgctttttgatatgaatggcgcaaatttttgatccccaatggccacggaaagactgaatcaggttaggacatcggtattccaagcgtcccagtctcttc
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C A G G     C
    G         | | |                 T T
    T       A G G C
      C A A        A     GGACTCTGTCCCC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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