The detailed information of tRNA gene sequence


Sequence ID>FG090100366
Genome IDAL590444
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr4
Start position on genome 119683
End posion on genome 119602
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cgatatcgttcatttcgaagggtccactttgcattttatttcagtttggtaaatctacggcattccacctggttgtactatggcacggagggacgcccga
tRNA gene sequence 
GGGACTTTGGCCGAGTGGTCTAAGGCGCTCGATTCAAGACTGAGTACGGTAACGTTCGGG
GGTTCGAATCCCCCAGGTCCCAttt
Downstream region at tRNA end position 
tgtcccgccacacagaggtcctctaatacttttattagcctttcaccctacaaatgatcgatgacaaatacttcgatgtctttaacgacaagtcgacact
Secondary structure (Cloverleaf model)
>FG090100366	Leu	CAA
                   a      Attt tgtcccgccacacagaggtcctctaatacttttattagcctttcaccctacaaatgatcgatgacaaatacttcgatgtctttaacgacaagtcgacact
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TACGGTAACGTTC
                    C - G
                    T - A
                    C - G
                    G + T
                    A   C
                  T       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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