The detailed information of tRNA gene sequence


Sequence ID>FG090100379
Genome IDAL590448
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr8
Start position on genome 68208
End posion on genome 68281
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctttcctcttgttttctctattcatcaccaatggctgtgcaaggacgcgatttatccctgtgcactctggtgtgtgatgcatgtgcagtaggtgggtagA
tRNA gene sequence 
GGGTCCGTAGCTCAGCGGTAGAGCAATTGATTGCAGATCAATCGGTCACAGGTTCGATTC
CTGTCGTGCCCTTtc
Downstream region at tRNA end position 
atttttctaagtttttcgcaccccatggaatcgccggaaatcctcagaaggctgaaggaagtcgctacccgctccaaggagcttgactcaaagctccagg
Secondary structure (Cloverleaf model)
>FG090100379	Cys	GCA
                   A      TTtc atttttctaagtttttcgcaccccatggaatcgccggaaatcctcagaaggctgaaggaagtcgctacccgctccaaggagcttgactcaaagctccagg
                     G - C
                     G - C
                     G - C
                     T + G
                     C   T
                     C - G
                     G - C          T T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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