The detailed information of tRNA gene sequence


Sequence ID>FG090100380
Genome IDAL590448
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr8
Start position on genome 107288
End posion on genome 107360
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
gagaagtgtggaagggaggagaagccacagagaaataaatgttttgtctaaggactgtgggggagcagagggagatgttgggtcatcttaggagtggcaa
tRNA gene sequence 
GTGACCTTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGGAAGGTCCCCAGTTCGAGC
CTGGGAGGTCGCAttc
Downstream region at tRNA end position 
ttttgttgcagggaggtgcagcaagcaaaaaagaatctcccaagctggagtcgaaccagcggccattcgatatcagcacacctctacagtcgaatgctct
Secondary structure (Cloverleaf model)
>FG090100380	Val	AAC
                   a      Attc ttttgttgcagggaggtgcagcaagcaaaaaagaatctcccaagctggagtcgaaccagcggccattcgatatcagcacacctctacagtcgaatgctct
                     G - C
                     T + G
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A          C G
                    T     G G G T C     A
      T G A        A      | | | | |     G
    G       T G T G       C C C A G     C
    G         | | |                 T T
    T       T C A C
      T A          G     AGGTC
                    T - A
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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