The detailed information of tRNA gene sequence


Sequence ID>FG090100385
Genome IDAL590449
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr10
Start position on genome 34328
End posion on genome 34410
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaaaactcacagaagtaccttggcattcgatgggctttcgaatggcgtttagaatgaatgcatcgtgcccgtattcattttgttgccttcgcaggctaa
tRNA gene sequence 
GACCTCGTAGCAAAGTGGTTAACGCGGTAGATTGCTAATCTATTTCCTTCTGGGAGCGCG
AGTTCGAATCTCGCCGAGGTCGCtc
Downstream region at tRNA end position 
tttttactggtatgcgagggtaggatataaaacttgccatgttgactgatacggcttaaacaaaagactatttctccatatccctgatgaggaacaatcc
Secondary structure (Cloverleaf model)
>FG090100385	Ser	GCT
                   a      GCtc tttttactggtatgcgagggtaggatataaaacttgccatgttgactgatacggcttaaacaaaagactatttctccatatccctgatgaggaacaatcc
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     G
    G       A A C G       G C G A G     C
    G           | |                 T T
    T       A C G C
      T A          G     TTCCTTCTGGGAGC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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