The detailed information of tRNA gene sequence


Sequence ID>FG090100387
Genome IDAL590449
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr10
Start position on genome 147667
End posion on genome 147738
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctcgaacgaccaagttttactataaacattaaagccttttaagttttgctttgttcctgttacccgagcttcctaggatctggagtctgggagggcagca
tRNA gene sequence 
GGGGGATTATCTTAGTGGTAGAGTGTTTGCTTCGCATGCAAGTGGCCCGGGTTCGATTCC
TGGATCCTCCACtt
Downstream region at tRNA end position 
ctttttctgcagaggcgataatttcgacaagctgtagtcccgacgagatgctgttttcaaaggagactctcaagtcttttgcacagtcgaaggggatttc
Secondary structure (Cloverleaf model)
>FG090100387	Ala	CGC
                   a      ACtt ctttttctgcagaggcgataatttcgacaagctgtagtcccgacgagatgctgttttcaaaggagactctcaagtcttttgcacagtcgaaggggatttc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     G G T C C     A
        G A        A      | | + | |     G
      T     T T C T       C C G G G     C
      G     + | |                   T T
      G     G A G T
        T A        G     TGGC
                    T + G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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