The detailed information of tRNA gene sequence


Sequence ID>FG090100388
Genome IDAL590449
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr10
Start position on genome 21671
End posion on genome 21599
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttatacatttgaagtgcattatccattaggggattttaggtccaccagatataatgagtctaccagcctgttggtggatattgattgctcccactgtga
tRNA gene sequence 
GCTTTTGTAGTGTAGTGGTTATCACGTATCCTTCACACGGATGAGGTCCTCGGTTCGAAC
CCGAGCAAAAGCAttt
Downstream region at tRNA end position 
tcgcaatcttttacaccatgcgtgtttggattaaaatcatggcggtctggacacccatggactttgacttccaagaaccaacattgctcgtctacgacct
Secondary structure (Cloverleaf model)
>FG090100388	Val	CAC
                   a      Attt tcgcaatcttttacaccatgcgtgtttggattaaaatcatggcggtctggacacccatggactttgacttccaagaaccaacattgctcgtctacgacct
                     G - C
                     C - G
                     T - A
                     T - A
                     T - A
                     T - A
                     G - C          C A
                    T     G A G C C     A
      T G A        A      | | | | |     G
    G       T G T G       C T C G G     C
    G         | | |                 T T
    T       T C A C
      T A          G     AGGTC
                    T + G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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