The detailed information of tRNA gene sequence


Sequence ID>FG090100505
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 120619
End posion on genome 120693
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gaagtcattttttgaattttttcgcgaaaatagccattaagtgctctttgttgaaatacgaaatatttaagcttttcagattagaagttctcacgaaaat
tRNA gene sequence 
TCCGATATAGTGTAATGGCTATCACTCGAGACTCTCCATCTTGAAATCCGGGTTCGATTC
CCGGTATCGGAGCCA
Downstream region at tRNA end position 
attctttttttacgtttttggcccattttgcagtgtcaaaatcctagaaacttgatttacttgatgcttttactaatttttataaaagtatgatatcgca
Secondary structure (Cloverleaf model)
>FG090100505	Glu	CTC
                   t      GCCA attctttttttacgtttttggcccattttgcagtgtcaaaatcctagaaacttgatttacttgatgcttttactaatttttataaaagtatgatatcgca
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     G G C C C     A
      T A A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | |                 T T
    C       T C A C
      T A          T     AAAT
                    C - G
                    G + T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       C
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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