The detailed information of tRNA gene sequence


Sequence ID>FG090100529
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 1511937
End posion on genome 1511854
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
gctttttttttgacgaaatggctagtattattgcggtatggatgtttcacgtgacaaatggaattcacgattttaatgagctcccgaagttcaacaaatT
tRNA gene sequence 
GGCAACTTGTCCGAGTGGTTAAGGAGAAAGATTAGAAATCTTTTGGGCTTTGCCCGCGCA
GGTTCGAGTCCTGCAGTTGTCGTta
Downstream region at tRNA end position 
ttttttctctattgcttaacgaatctatatttggtaccaagaatatgttgttacgttctaaagatatcgaatgcaatttatttttttgaatataaaaata
Secondary structure (Cloverleaf model)
>FG090100529	Ser	AGA
                   T      GTta ttttttctctattgcttaacgaatctatatttggtaccaagaatatgttgttacgttctaaagatatcgaatgcaatttatttttttgaatataaaaata
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C A G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTTTGCCCGC
                    A - T
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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