The detailed information of tRNA gene sequence


Sequence ID>FG090100530
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 1165053
End posion on genome 1164982
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ccaaagtcggccaaaagtcgattttcctctgcacgtgacatttatggcgtgatttttacagctcagatttcttttgaccatttttgtcttcaaccaatta
tRNA gene sequence 
GCCGGTCTAGTATAGTGGTTAGTACACTTCGTTGTGGCCGAAGAAACCCAAGTTCGATTC
CTGGGACCGGCAgtt
Downstream region at tRNA end position 
atttttttctcatttttgtggagtatatgcaggatttcgatactgaaatgagaaatgccaaaactcagctgtgagagttgaaatcttgaatctggttgta
Secondary structure (Cloverleaf model)
>FG090100530	His	GTG
                   a      Agtt atttttttctcatttttgtggagtatatgcaggatttcgatactgaaatgagaaatgccaaaactcagctgtgagagttgaaatcttgaatctggttgta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G          T T
                    T     G G T C C     A
      T G A        A      | | |   |     G
    G       T A T G       C C A A G     C
    G       + | | |                 T T
    T       G T A C
      T A          A     AAAC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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