The detailed information of tRNA gene sequence


Sequence ID>FG090100531
Genome IDCM000437
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome ch1
Start position on genome 1078189
End posion on genome 1078108
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agttttttttttagaaaactgtagaaaacgtgatatacgcatgataaacgcgtgataataatttcggatgtggaagctacaaaggatgtttttcaataaa
tRNA gene sequence 
GGCTCTGTGGCCGAGTGGTTAAGGCGGTAGACTCAAGTTCTACTATCGTAAAGATGCACG
CGTTCGAACCGCGTCGGAGTCAtta
Downstream region at tRNA end position 
tttttctttttcttcatcgtatctttttttttgcaatcatttacattcacctacacttcctatcaatgatattgttttatattaacgctaattatgatta
Secondary structure (Cloverleaf model)
>FG090100531	Leu	CAA
                   a      Atta tttttctttttcttcatcgtatctttttttttgcaatcatttacattcacctacacttcctatcaatgatattgttttatattaacgctaattatgatta
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          C A
                    T     T G C G C     A
      T G A        G      | | | | |     G
    G       G C C G       A C G C G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATCGTAAAGATGC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       T
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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