The detailed information of tRNA gene sequence


Sequence ID>FG090100566
Genome IDCP000498
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr4
Start position on genome 175980
End posion on genome 175910
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ctaggataaaaacttctggctatattacttgacggcacgtgcaaagtcacgtgctctataacctgaacagcgaaaacttaaggaagttaggaatttctgc
tRNA gene sequence 
GCGCGAGTGGTTTAGTGGTAAAATTCAGCGTTCCCATTGCTGTGCCCCGGGTTCGATTCC
CGGCTCGCGCAtgt
Downstream region at tRNA end position 
ggaattgaacttttttttgcctcttctaagctgttgcagttgaataaagactatctcgaagagaaagagaaactggataaggtattcttcaagttgtttc
Secondary structure (Cloverleaf model)
>FG090100566	Gly	CCC
                   c      Atgt ggaattgaacttttttttgcctcttctaagctgttgcagttgaataaagactatctcgaagagaaagagaaactggataaggtattcttcaagttgtttc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T T
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     T T T G       C C G G G     C
      G     | | | +                 T T
      G     A A A T
        T A        T     TGCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G + T
                  T       T
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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