The detailed information of tRNA gene sequence


Sequence ID>FG090100571
Genome IDCP000499
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr5
Start position on genome 1377095
End posion on genome 1377168
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tccctcaaaattaaatctgacaaaaactaaaaacacgtgactttttaggcatgataaaactatgacccaaatggatgtcaaaccttcctaacaacaaatc
tRNA gene sequence 
GCCTGCGTAGCGTAATGGTTAACGCGTTTGACTTCTAATCAAAAGATTGCGGGTTCGACT
CCCGCCGTGGGTTCta
Downstream region at tRNA end position 
tttgcggttttagctcagttgggagagcgtcagactgaagagattcagtcacagttaatctgaaggtcctgtgttcgatccacagaaatcgcatatgttt
Secondary structure (Cloverleaf model)
>FG090100571	Arg	TCT
                   c      TCta tttgcggttttagctcagttgggagagcgtcagactgaagagattcagtcacagttaatctgaaggtcctgtgttcgatccacagaaatcgcatatgttt
                     G + T
                     C - G
                     C - G
                     T + G
                     G + T
                     C - G
                     G - C          T C
                    T     C G C C C     A
      T A A        A      | | | | |     G
    G       T G C G       G C G G G     C
    G       | | | |                 T T
    T       A C G C
      T A          G     AGATT
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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