The detailed information of tRNA gene sequence


Sequence ID>FG090300007
Genome IDCP000501
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr7
Start position on genome 549481
End posion on genome 549552
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttctaagtccaaaaggaaaaccggcctacccatatacaggtttcccgtcaacgtgacaaaagcaactttcgtggggcactatatattaggattaaaatc
tRNA gene sequence 
GGTTCCATGGTCTGGCGGCATGACGTCTCTCTCACTCAGAGAAGGTCACGAGTCCGATCC
TCGTTGGGATCAact
Downstream region at tRNA end position 
gattttttcccgtttgttctgtcaggaaatatcacagcgtatgagaatctcaagaaaacaactcactccagctgtttacacatggagaactttactacta
Secondary structure (Cloverleaf model)
>FG090300007	Val	CAC
                   c      Aact gattttttcccgtttgttctgtcaggaaatatcacagcgtatgagaatctcaagaaaacaactcactccagctgtttacacatggagaactttactacta
                     G - C
                     G + T
                     T - A
                     T + G
                     C - G
                     C - G
                     A - T          C T
                    T     T G C T C     A
        G G        G      | | | | |     G
      C     T C T G       A C G A G     C
      G       | | |                 T C
      G     T G A C
        C A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    T - A
                  C       C
                  T       T
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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