The detailed information of tRNA gene sequence


Sequence ID>FG090300008
Genome IDCP000501
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr7
Start position on genome 868115
End posion on genome 868196
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tactgtcctgatttgaatttacattggattatgccttatggcgtagtggaacagtgtgcacagtttctgtgtagtcgactgttcgagtccaactagtgaa
tRNA gene sequence 
GATACGATGGCCGAGTGGTTAAGGCGAAGGATGCAGGTTCCTTTGGGCTCTGCCCGCGCA
GGTTCGAACCCTGCTCGTGTCGata
Downstream region at tRNA end position 
tatttttgcaaatgaatctattatgctaatagtatttctttttgtataatctattgcttagaaatagtaaaacagtcaagaaagagaatacaatttttat
Secondary structure (Cloverleaf model)
>FG090300008	Leu	CAG
                   a      Gata tatttttgcaaatgaatctattatgctaatagtatttctttttgtataatctattgcttagaaatagtaaaacagtcaagaaagagaatacaatttttat
                     G - C
                     A - T
                     T + G
                     A - T
                     C - G
                     G - C
                     A - T          C A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       T
                  G       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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