The detailed information of tRNA gene sequence


Sequence ID>FG090500004
Genome IDAE017347
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr7
Start position on genome 1040734
End posion on genome 1040648
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tgaaagcacccgggtcaggcccagtagtgaacggacgatgaaccaaatgtgattctgaggcataaacatatagtttggctgatattttgattttctgtcc
tRNA gene sequence 
GTCTCTATCGTCTAGTTCGGTTAGGACGCTACGTTGTGGCCGTGGAAACGGTTGTTCGAA
TCAGCCTAGGGACAtaa
Downstream region at tRNA end position 
tctttttgcttttttcttcttcttcttttacggggctataaaatttccacgtcaggatgtcgcaatcgcagcataataacaataattaattaacaattgc
Secondary structure (Cloverleaf model)
>FG090500004	His	GTG
                   c      Ataa tctttttgcttttttcttcttcttcttttacggggctataaaatttccacgtcaggatgtcgcaatcgcagcataataacaataattaattaacaattgc
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     T - A
                     A - T          T A
                    T     C C G A C     A
    T T G A        C      | | + | |     G
  C         T C T G       G G T T G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AAAC
                    C - G
                    T + G
                    A - T
                    C - G
                    G - C
                  T       C
                  T       G *
                    G T G
intron: position=38, length=13 (in A-loop)
TTATACCTCAGCG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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