The detailed information of tRNA gene sequence


Sequence ID>FG092910011
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 2578426
End posion on genome 2578524
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
aatgtcgtttaacttcttaacaatacatttgtttacaacttgtttttatttttttgtcatattttcaactttgcgaaacacactatatatactatatagtttgctacaaatcaagcaaca
tRNA gene sequence 
GCTCCCGTGGCCAAGCTGGTTAAGGCCTCATGCTTATAACGTGGAAATCGCGAGTTCGAT
CCTCGCCGGGAGCActt
Downstream region at tRNA end position 
ctttttttgcaaagaatttttacacagtcaagattgttggcttgtctagtgtatggatcattgtaaaataatttttataagtatatgtagtacttgattttttgcaattgcttatgtaga
Secondary structure (Cloverleaf model)
>FG092910011	Ile	TAT
                   a      Actt ctttttttgcaaagaatttttacacagtcaagattgttggcttgtctagtgtatggatcattgtaaaataatttttataagtatatgtagtacttgattttttgcaattgcttatgtaga
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     C G C T C     A
      C G A        G      | | | | |     G
    T       A C C G       G C G A G     C
    G         | | |                 T T
    G       A G G C
      T T A        C     AAATC
                    T + G
                    C - G
                    A - T
                    T + G
                    G - C
                  C       A
                  T       A *
                    T A T
intron: position=38, length=25 (in A-loop)
TGATACTCCCCTTAGGAGGTGTGTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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