The detailed information of tRNA gene sequence


Sequence ID>FG092910019
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 3443055
End posion on genome 3443144
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aaataagtacttttgtcgtaaaagttatagattgatgaattagaagaacatcaatttgtcatattactcacacttgaatttcctatatatatattacattttagagcagccgcttagagc
tRNA gene sequence 
GGCCTCGTGGCCTAGAAGTAAGGCGTTGGTTTCCGGCGCCAAAGATCGCGAGTGCAAATC
TCGCCGTGGTCGctt
Downstream region at tRNA end position 
cttttattttttgccttctagaaaaggaattattatattaagcatgagtaagataatattccatctaagcaaatttgctgtcaactttgaaaaattactatatttatccttgaatttgtt
Secondary structure (Cloverleaf model)
>FG092910019	Arg	CCG
                   c      Gctt cttttattttttgccttctagaaaaggaattattatattaagcatgagtaagataatattccatctaagcaaatttgctgtcaactttgaaaaattactatatttatccttgaatttgtt
                     G - C
                     G + T
                     C - G
                     C - G
                     T   T
                     C - G
                     G - C          T A
                    T     C G C T C     A
        G A        G      | | | | |     A
      A     T C C G       G C G A G     C
      A     | | | |                 T G
      G     A G G C
        T A        G     AGATC
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  T       C
                  T       G *
                    C C G
intron: position=38, length=18 (in A-loop)
TGGAGGAGACTCCAGGTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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