The detailed information of tRNA gene sequence


Sequence ID>FG092910024
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 4796977
End posion on genome 4797059
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcaggcacccttgctaaattaatcaatgatgatgatgattattttattttatagcttgacattcgttcttttttttaaccttttattaataatgggttaaattataacatcatatcgact
tRNA gene sequence 
GGGGATGTAGTTTAGGGGTATAACGTTTCATTCGCATTGAAAAGGTCCCGGGTTCGATTC
CCGGCATCTCCAatg
Downstream region at tRNA end position 
atgttagaaactatttttcctttttatccacatttgttttatttattgactacacggcaaacaggttacatacacaaatgtatactagaaaaaatataaaagtgaatttactaatataag
Secondary structure (Cloverleaf model)
>FG092910024	Ala	CGC
                   t      Aatg atgttagaaactatttttcctttttatccacatttgttttatttattgactacacggcaaacaggttacatacacaaatgtatactagaaaaaatataaaagtgaatttactaatataag
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     G G C C C     A
        G A        A      | | | | |     G
      G     T T T G       C C G G G     C
      G       | | |                 T T
      G     T A A C
        T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    A - T
                  T       T
                  T       A *
                    C G C
intron: position=38, length=11 (in A-loop)
TAGTTCGCACC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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